2023
[61] Mariana Neves, Antonio Jimeno Yepes, Aurélie Névéol, Rachel Bawden, Giorgio Maria Di Nunzio, Roland Roller, Philippe Thomas, Federica Vezzani, Maika Vicente Navarro, Lana Yeganova, Dina Wiemann, Cristian Grozea. Findings of the WMT 2023 Biomedical Translation Shared Task: Evaluation of ChatGPT 3.5 as a Comparison System. WMT23-Eighth Conference on Machine Translation. 2023.
[60] Robert Oehring, Nikitha Ramasetti, Sharlyn Ng, Roland Roller, Philippe Thomas, Axel Winter, Max Maurer, Simon Moosburner, Nathanael Raschzok, Can Kamali, Johann Pratschke, Christian Benzing, Felix Krenzien. Use and accuracy of decision support systems using artificial intelligence for tumor diseases: a systematic review and meta-analysis. Frontiers in Oncology. Volume 13, 2023.
[59] Mohammed Bin Sumait, Aleksandra Gabryszak, Leonhard Hennig, Roland Roller. Factuality Detection using Machine Translation - a Use Case for German Clinical Text. To appear in Proceedings of the 19th Conference on Natural Language Processing (KONVENS 2023).
[58] Sharlyn S. T. Ng, Robert Oehring, Nikitha Ramasetti, Roland Roller, Philippe Thomas, Yuxuan Chen, Simon Moosburner, Axel Winter, Max-Magnus Maurer, Timo A. Auer, Can Kamali, Johann Pratschke, Christian Benzing and Felix Krenzien. Concordance of a decision algorithm and multidisciplinary team meetings for patients with liver cancer—a study protocol for a randomized controlled trial. Trials, 24(1), 2023. p.577.
[57] Akhila Abdulnazar, Markus Kreuzthaler, Roland Roller, Stefan Schulz. SapBERT-Based Medical Concept Normalization Using SNOMED CT. Studies in Health Technology and Informatics, 302, pp.825-826.
[56] David Samhammer, Susanne Beck, Klemens Budde, Aljoscha Burchardt, Michelle Faber, Simon Gerndt, Sebastian Möller, Bilgin Osmanodja, Roland Roller, Peter Dabrock. Klinische Entscheidungsfindung mit Künstlicher Intelligenz: Ein interdisziplinärer Governance-Ansatz. 2023 May 3. Berlin, Heidelberg: Springer Berlin Heidelberg.
[55] Iyadh Ben Cheikh Larbi, Aljoscha Burchhardt, Roland Roller.
Clinical Text Anonymization, its Influence on Downstream NLP Tasks and the Risk of Re-Identification
Proceedings of the 17th Conference of the European Chapter of the Association for Computational Linguistics: Student Research Workshop, Dubrovnik, Croatia, 2023
[54] Roland Roller, Aljoscha Burchhardt, David Samhammer, Simon Ronicke, Wiebke Duettmann, Sven Schmeier, Sebastian Möller, Peter Dabrock, Klemens Budde, Manuel Mayrdorfer, Bilgin Osmanodja.
When Performance is not Enough - A Multidisciplinary View on Clinical Decision Support
PLOS ONE 18(4): e0282619, 2023.
[53] Davy Weissenbacher, Karen O’Connor, Siddharth Rawal, Yu Zhang, Richard Tzong-Han Tsai, Timothy Miller, Dongfang Xu, Carol Anderson, Bo Liu, Qing Han, Jinfeng Zhang, Igor Kulev, Berkay Köprü, Raul Rodriguez-Esteban, Elif Ozkirimli, Ammer Ayach, Roland Roller, Stephen Piccolo, Peijin Han, VG Vinod Vydiswaran, Ramya Tekumalla, Juan M Banda, Parsa Bagherzadeh, Sabine Bergler, João F Silva, Tiago Almeida, Paloma Martinez, Renzo Rivera-Zavala, Chen-Kai Wang, Hong-Jie Dai, Luis Alberto Robles Hernandez, Graciela Gonzalez-Hernandez.
Automatic Extraction of Medication Mentions from Tweets—Overview of the BioCreative VII Shared Task 3 Competition
Database: The Journal of Biological Databases & Curation, February 2023.
2022
[52] David Samhammer, Roland Roller, Patrik Hummel, Bilgin Osmanodja, Aljoscha Burchardt, Manuel Mayrdorfer, Wiebke Duettmann, Peter Dabrock.
"Nothing Works Without the Doctor." Physicians' Perception on Clinical Decision-Making and Artificial Intelligence
Frontiers in Medicine, 2022.
[51] Mariana Neves, Antonio Jimeno Yepes, Amy Siu, Roland Roller, Philippe Thomas, Maika Vicente Navarro, Lana Yeganova, Dina Wiemann, Giorgio Maria Di Nunzio, Federica Vezzani, Christel Gerardin, Rachel Bawden, Darryl Johan Estrada, Salvador Lima-López, Eulàlia Farré-Maduell, Martin Krallinger, Cristian Grozea, Aurélie Névéol.
Findings of the WMT 2022 Biomedical Translation Shared Task: Monolingual Clinical Case Reports
In Proceedings of the Seventh Conference on Machine Translation (WMT) at EMNLP 2022.
[50] Roland Roller, Manuel Mayrdorfer, Wiebke Duettmann, Marcel Ganesh Naik, Danilo Schmidt, Fabian Halleck, Patrik Hummel, Aljoscha Burchhardt, Sebastian Möller, Peter Dabrock, Bilgin Osmanodja, Klemens Budde.
Evaluation of a clinical decision support system for detection of patients at risk after kidney transplantation. Frontiers in public health, 2022.
[49] Kristina Boss, Roland Roller, Alexander Woywodt, Andreas Kribben, Klemens Budde, Stefan Becker.
Künstliche Intelligenz in der Nephrologie. Die Nephrologie, 2022.
[48] Roland Roller, Aljoscha Burchardt, Nils Feldhus, Laura Seiffe, Klemens Budde, Simon Ronicke and Bilgin Osmanodja.
An Annotated Corpus of Textual Explanations for Clinical Decision Support. Proceedings of the International Conference on Language Resources and Evaluation (LREC 2022), Marseille, France, 2022.
[47] Lisa Raithel, Philippe Thomas, Roland Roller, Oliver Sapina, Sebastian Möller, Pierre Zweigenbaum.
Cross-lingual Approaches for the Detection of Adverse Drug Reactions in German from a Patient's Perspective. Proceedings of the International Conference on Language Resources and Evaluation (LREC 2022), Marseille, France, 2022.
[46] Laura Seiffe, Fares Kallel, Babak Naderi, Sebastian Möller, Roland Roller.
Subjective Text Complexity Assessment for German. Proceedings of the International Conference on Language Resources and Evaluation (LREC 2022), Marseille, France, 2022.
2021
[45] Lana Yeganova, Dina Wiemann, Mariana Neves, Federica Vezzani, Amy Siu, Iñigo Jauregi Unanue, Maite Oronoz, Nancy Mah, Aurélie Névéol, David Martinez, Rachel Bawden, Giorgio Maria Di Nunzio, Roland Roller, Philippe Thomas, Cristian Grozea, Olatz Perez de Viñaspre, Maika Vicente Navarro, Antonio Jimeno Yepes.
Findings of the WMT 2021 Biomedical Translation Shared Task: Summaries of Animal Experiments as New Test Set
. In Proceedings of the Sixth Conference on Machine Translation (WMT) at EMNLP 2021.
[44] Roland Roller, Ammer Ayach and Lisa Raithel.
Boosting Transformers using Background Knowledge, or how to detect Drug Mentions in Social Media using Limited Data. Proceedings of BioCreative VII Challenge Evaluation Workshop 2021.
[43] Hanna Suominen, Lorraine Goeuriot, Liadh Kelly, Laura Alonso Alemany, Elias Bassani, Nicola Brew-Sam, Viviana Cotik, Darío Filippo, Gabriela González-Sáez, Franco Luque, Philippe Mulhem, Gabriella Pasi, Roland Roller, Sandaru Seneviratne, Rishabh Upadhyay, Jorge Vivaldi, Marco Viviani, and Chenchen Xu.
Overview of the CLEF eHealth Evaluation Lab 2021. CLEF 2021 - 12th Conference and Labs of the Evaluation Forum, Lecture Notes in Computer Science (LNCS), Springer, September 2021.
[42] Viviana Cotik, Laura Alonso Alemany, Darío Filippo, Franco Luque, Roland Roller, Jorge Vivaldi, Ammer Ayach, Fernando Carranza, Lucas Defrancesca, Antonella Dellanzo, Macarena Fernández Urquiza.
Overview of CLEF eHealth Task 1 - SpRadIE: A challenge on Information Extraction from Spanish Radiology Reports. CLEF 2021 Evaluation Labs and Workshop: Online Working Notes, CEUR-WS, 2021.
[41] Lorraine Goeuriot, Hanna Suominen, Liadh Kelly, Laura Alonso Alemany, Nicola Brew-Sam, Viviana Cotik, Dario Filippo, Gabriela Gonzalez Saez, Franco Luque, Philippe Mulhem, Gabriella Pasi, Roland Roller, Sandaru Seneviratne, Jorge Vivaldi, Marco Viviani and Chenchen Xu.
CLEF eHealth Evaluation Lab 2021
In ECIR 2021 CLEF short papers track.
2020
[40] Wiebke Duettmann, Marcel G Naik, Bianca Zukunft, Bilgin Osmonodja, Friederike Bachmann, Mira Choi, Roland Roller, Manuel Mayrdorfer, Fabian Halleck, Danilo Schmidt, Klemens Budde.
eHealth in Transplantation
In Transplant International: Official Journal of the European Society for Organ Transplantation. 2020.
[39] Roland Roller, Laura Seiffe, Ammer Ayach, Sebastian Möller, Oliver Marten, Michael Mikhailov, Christoph Alt, Danilo Schmidt, Fabian Halleck, Marcel Naik, Wiebke Duettmann and Klemens Budde.
Information Extraction Models for German Clinical Text
In 2020 IEEE International Conference on Healthcare Informatics (ICHI). Oldenburg, 2020.
[38] Rachel Bawden, Giorgio Maria Di Nunzio, Cristian Grozea, Iñigo Jauregi Unanue, Antonio Jimeno Yepes, Nancy Mah, David Martinez, Aurélie Névéol, Mariana Neves, Maite Oronoz, Olatz Perez de Viñaspre, Massimo Piccardi, Roland Roller, Amy Siu, Philippe Thomas, Federica Vezzani, Maika Vicente Navarro, Dina Wiemann, Lana Yeganova.
Findings of the WMT 2020 Biomedical Translation Shared Task: Basque, Italian and Russian as New Additional Languages
In Proceedings of the Fifth Conference on Machine Translation (WMT20) at EMNLP.
[37] Nils Rethmeier, Necip Oguz Serbetci, Sebastian Möller and Roland Roller.
EffiCare: Better Prognostic Models via Resource-Efficient Health Embeddings
In AMIA Annual Symposium Proceedings. American Medical Informatics Association, 2020.
[36]
Laura Seiffe, Oliver Marten, Michael Mikhailov, Sven Schmeier, Sebastian Möller and Roland Roller.
From Witch’s Shot to Music Making Bones - Resources for Medical Laymen to Technical Language and Vice Versa
In Proceedings of the International Conference on Language Resources and Evaluation (LREC 2020), Marseille, France, 2020 [
pdf]
2019
[35]
Roland Roller, Gaurav Vashisth, Philippe Thomas, He Wang, Michael Mikhailov and Mark Stevenson.
Graph-KD: Exploring Relational Information for Knowledge Discovery
In Proceedings of the ISWC 2019 Posters & Demonstrations, Auckland, New Zealand, 2019 [
pdf]
[34] Wiebke Düttmann-Rehnolt, Danilo Schmidt, Fabian Halleck, Oliver Staeck, Roland Roller, Martin Högl, Gero Lurz, Alexander Löser, Philipp Legge, Klemens Budde.
Neuartige Kommunikationswege und Strukturen zur Optimierung der häuslichen Versorgung am Beispiel von nierentransplantierten Patienten
In: Digitale Transformation von Dienstleistungen im Gesundheitswesen. Springer 2019
[33]
Gaurav Vashisth, Jan-Niklas Voigt-Antons, Michael Mikhailov and Roland Roller.
Exploring Diachronic Changes of Biomedical Knowledge using Distributed Concept Representations
In Proceedings of BioNLP 2019, Florence, Italy, 2019 [
download]
[32]
Stefan Becker, Klemens Budde, Frank Tillmann, Karoline Koisar, Laura Wamprecht, Markus Müschenich, Sven Meister, Roland Roller.
Digitale Nephrologie.
In: DGIM/DMW "Digitale Medizin" [
pdf].
[31] Ziawasch Abedjan, Nozha Boujemaa, Stuart Campbell, Patricia Casla, Supriyo Chatterjea, Sergio Consoli, Cristobal Costa-Soria, Paul Czech, Marija Despenic, Chiara Garattini, Dirk Hamelinck, Adrienne Heinrich, Wessel Kraaij, Jacek Kustra, Aizea Lojo, Marga Martin Sanchez, Miguel A. Mayer, Matteo Melideo, Ernestina Menasalvas, Frank Moller Aarestrup, Elvira Narro Artigot, Milan Petkovic, Diego Reforgiato Recupero, Alejandro Rodriguez Gonzalez, Gisele Roesems Kerremans, Roland Roller, Mario Romao, Stefan Ruping, Felix Sasaki, Wouter Spek, Nenad Stojanovic, Jack Thoms, Andrejs Vasiljevs, Wilfried Verachtert, Roel Wuyts.
Data Science in healthcare: benefits, challenges and opportunities.
In Consoli, Sergio, Reforgiato Recupero, Diego, Petković, Milan (Eds.), Data Science for Healthcare - Methodologies and Applications. Springer
2018
[30]
Johannes Kirschnick, Philippe Thomas, Roland Roller, Leonhard Hennig.
SIA: a scalable interoperable annotation server for biomedical named entities.
In: Journal of Cheminformatics (JCheminf) 10:63, BioMed Central 12/2018. [
pdf]
[29]
Roland Roller, Philippe Thomas and Sven Schmeier.
Football and Beer - a Social Media Analysis on Twitter in Context of the FIFA Football World Cup 2018.
In Proceedings of Social Media Mining for Health Applications (SMM4H), Brussels, Belgium [
download]
[28]
Elif Kara, Tatjana Zeen, Aleksandra Gabryszak, Klemens Budde, Danilo Schmidt and Roland Roller.
A Domain-adapted Dependency Parser for German Clinical Text.
In Proceedings of KONVENS 2018 "The Conference on Natural Language Processing", Vienna, Austria [
pdf][
poster]
[27]
Julian Moreno Schneider, Roland Roller, Peter Bourgonje, Stefanie Hegele and Georg Rehm.
Towards the Automatic Classification of Offensive Language and Related Phenomena in German Tweets.
In Proceedings of GermEval 2018, 14th Conference on Natural Language Processing (KONVENS 2018), Vienna, Austria [
pdf]
[26]
Danilo Schmidt, Verena Graf, Roland Roller, Oliver Staeck, Thomas Tolxdorff,
Thorsten Schaaf, Alexander Löser, Feiyu Xu, Hans Uszkoreit, Philipp
Legge, Gero Lurz, Marco Wedekind, Kai Sachs, Sonja Oechsler, Klemens
Budde, Sebastian Gaede, Fabian Halleck.
Integrierte Versorgung chronisch kranker Patienten am Beispiel von MACSS. In Aljoscha Burchardt, Hans
Uszkoreit (Eds.), IT für soziale Inklusion: Digitalisierung - Künstliche
Intelligenz - Zukunft für alle (pp. 41-50). Berlin, Boston: De Gruyter.
[pdf]
[25]
Roland Roller, Madeleine Kittner, Dirk Weissenborn, Ulf Leser.
Cross-lingual Candidate Search for Biomedical Concept Normalization. In Proceedings of MultilingualBIO, Miyazaki, Japan
[pdf] [slides]
2017
[24]
Roland Roller, Nils Rethmeier, Philippe Thomas, Marc Hübner, Hans Uszkoreit, Fabian Halleck, Oliver Staeck, Klemens Budde and Danilo Schmidt.
Detecting Named Entities and Relations in German Clinical Reports. [pdf] In Proceedings of GSCL 2017, Berlin, Germany
[23]
Viviana Cotik, Darío Filippo, Roland Roller, Hans Uszkoreit and Feiyu Xu.
Annotation of Entities and Relations in Spanish Radiology Reports. [pdf] In Proceedings of RANLP 2017, Varna Bulgaria
[22] F. Halleck, D. Schmidt, S. Georgi, V. Graf, S. Gaede, R. Roller, K. Budde und O. Staeck. mHealth und digitales Management nach Nierentransplantation. In Nieren- und Hochdruckkrankheiten, November 2017
[21]
Antonio Jimeno Yepes, Aurélie Névéol, Mariana Neves, Karin Verspoor, Ondrej
Bojar, Arthur Boyer, Cristian Grozea, Barry Haddow, Madeleine Kittner,
Yvonne Lichtblau, Pavel Pecina, Roland Roller, Amy Siu, Philippe Thomas, and Saskia Trescher.
Findings of the WMT 2017 Biomedical Translation Shared Task. In Proceedings of the Second Conference on Machine Translation (WMT17) at EMNLP. Copenhagen, Denmark
[pdf]
[20]
Jurica Ševa, Madeleine Kittner, Roland Roller and Ulf Leser.
Multi-lingual ICD-10 coding using a hybrid rule-based and supervised classification approach at CLEF eHealth
2017. CLEF 2017 Online Working Notes. CEUR-WS, Dulin, Ireland
[pdf]
2016
[19]
Viviana Cotik, Roland Roller, Feiyu Xu, Hans Uszkoreit, Klemens Budde and Danilo Schmidt.
Negation Detection in Clinical Reports Written in German.
In Proceedings of the 5th Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM),
Osaka, Japan
[pdf]
[German NegEx trigger set]
[18]
Roland Roller, Hans Uszkoreit, Feiyu Xu, Laura Seiffe, Michael Mikhailov, Oliver Staek, Klemens Budde, Fabian Halleck and Danilo Schmidt.
A fine-grained corpus annotation schema of German nephrology records. In Proceedings of the Clinical Natural Language Processing Workshop, Osaka, Japan
[pdf]
[17]
Roland Roller.
Detecting Biomedical Relations using Distant Supervision.
PhD Thesis, University of Sheffield.
[pdf]
[16]
Dirk Weissenborn, Roland Roller, Feiyu Xu, Hans Uszkoreit and Enrique Garcia Perez.
A Light-weight & Robust System for Clinical Concept Disambiguation.
In Proceedings of the 7th International Symposium on Semantic Mining in Biomedicine, SMBM 2016, Potsdam, Germany
[pdf]
2015
[15]
Roland Roller and Mark Stevenson.
Held-out versus
Gold Standard: Comparison of Evaluation Strategies for Distantly
Supervised Relation Extraction from Medline abstracts.
In Proceedings of the The Sixth International Workshop on Health Text
Mining and Information Analysis (Louhi), Lisbon, Portugal
[pdf] [poster] [corpus]
[14]
Roland Roller, Eneko Agirre, Aitor Soroa and Mark Stevenson.
Improving distant supervision using inference learning. Proceedings of the 53rd Annual Meeting of the Association for
Computational Linguistics and the 7th International Joint Conference on
Natural Language Processing, Beijing, China
[pdf] [corpus]
[13]
Roland Roller; Mark Stevenson.
Making the most of limited training data using distant supervision. In Proceedings of the BioNLP 2015 Workshop, Beijing, China
[pdf]
2014
[12]
Roland Roller; Mark Stevenson.
Self-Supervised Relation Extraction using UMLS. Information Access Evaluation. Multilinguality, Multimodality, and
Interaction - 5th International Conference of the CLEF Initiative, Sheffield, UK
The publication won the best paper award of CLEF 2014.
[11 ]
Roland Roller; Mark Stevenson.
Applying UMLS for Distantly Supervised Relation Detection,
Proceedings of the The Fifth International Workshop on Health Text Mining and Information Analysis,
Gothenburg, Sweden
[pdf]
2013
[10]
Roland Roller; Mark Stevenson.
Identification of Genia Events using Multiple Classifiers,
Proceedings of the BioNLP Shared Task 2013 Workshop, pages 125-129, Sofia,
Bulgaria
[pdf]
2012
[9] Tatjana Scheffler; Roland Roller; Florian Kretzschmar; Sebastian Möller; Norbert Reithinger. Natural vs. Synthesized Speech in Spoken Dialog Systems Research - Comparing the Performance of Recognition Results. Proceedings of Sprachkommunikation (10. IGT-Fachtagung), Braunschweig
[8] Roland Roller; Shinji Watanabe; Tomoharu Iwata.
Effect of Dialog Acts on Word Use in Polylogue, Proceedings of ICASSP 2012, Kyoto, Japan
2011
[7] Roland Roller; Tatjana Scheffler; Norbert Reithinger. Human-Machine Corpus Analysis for Generation and
Interaction with Spoken Dialog Systems, In: KI 2011: Advances in Artificial Intelligence. German Conference on Artificial Intelligence (KI-2011), Berlin, Germany
[6] Tatjana Scheffler; Roland Roller; Norbert Reithinger.
SpeechEval: A Domain-Independent User Simulation Platform for Spoken Dialog System Evaluation, Proceedings of IWSDS 2011
2010
[5] Jana Götze; Tatjana Scheffler; Roland Roller; Norbert Reithinger.
User Simulation for the Evaluation of Bus Information Systems,
Proceedings of 2010 IEEE Workshop on Spoken Language Technology.
IEEE Workshop on Spoken Language Technology (SLT-2010), December 12-15,
Berkeley, CA, United States
2009
[4] Tatjana Scheffler; Roland Roller; Norbert Reithinger.
SpeechEval - Evaluating Spoken Dialog Systems by User Simulation,
Proceedings of the 6th IJCAI Workshop on Knowledge and Reasoning in
Practical Dialogue Systems (KRPD-09), July 12, Pasadena, CA, United
States
[3] Tatjana Scheffler; Roland Roller; Norbert Reithinger.
Semi-Automatic Creation of Resources for Spoken Dialog Systems,
KI 2009: Advances in Artificial Intelligence. German Conference on
Artificial Intelligence (KI-2009), September 15-18, Paderborn, Germany
[2]
Tatjana Scheffler; Roland Roller; Norbert Reithinger.
"VOICE Awards": A German Human-Machine Dialog Corpus, American Association of Corpus Linguistics, Edmonton, Canada, 2009.
[corpus]
[1] Sebastian Möller; Robert Schleicher; Dmitry Butenkov; Klaus-Peter Engelbrecht;
Florian Gödde; Tatjana Scheffler; Roland Roller; Norbert Reithinger.
Usability Engineering for Spoken Dialog Systems via Statistical User Models,
First International Workshop on Spoken Dialogue Systems Technology.
International Workshop On Spoken Dialogue Systems Technology
(IWSDS-2009), December 9-11, Kloster Irsee, Germany, n/a, 2009.
